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Textbook of Diagnostic Microbiology 6th Edition by Connie R. Mahon, ISBN-13: 978-0323613170

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Description

Textbook of Diagnostic Microbiology 6th Edition by Connie R. Mahon, ISBN-13: 978-0323613170

[PDF eBook eTextbook] – Available Instantly

  • Publisher: ‎ Saunders; 6th edition (April 6, 2018)
  • Language: ‎ English
  • Large size file: 52 MB
  • ISBN-10: ‎ 0323613179
  • ISBN-13: ‎ 978-0323613170

Learn to develop the problem-solving skills necessary for success in the clinical setting! The Textbook of Diagnostic Microbiology, 6th Edition uses a reader-friendly “building-block” approach to the essentials of diagnostic microbiology. This updated edition has new content on viruses like Zika, an expanded molecular chapter, and the latest information on prevention, treatment modalities, and CDC guidelines. Updated photos offer clear examples of automated lab instruments, while case studies, review questions, and learning objectives present information in an easy-to-understand, accessible manner for students at every level.

 

  • A building-block approach encourages you to use previously learned information to sharpen critical-thinking and problem-solving skills.
  • Full-color design, with many full-color photomicrographs, prepares you for the reality of diagnostic microbiology.
  • A case study at the beginning of each chapter provides you with the opportunity to form your own questions and answers through discussion points.
  • Hands-on procedures describe exactly what takes place in the micro lab, making content more practical and relevant.
  • Agents of bioterrorism chapter furnishes you with the most current information about this hot topic.
  • Issues to Consider boxes encourages you to analyze important points.
  • Case Checks throughout each chapter tie content to case studies for improved understanding.
  • Bolded key terms at the beginning of each chapter equip you with a list of the most important and relevant terms in each chapter.
  • Learning objectives at the beginning of each chapter supply you with a measurable outcome to achieve by completing the material.
  • Review questions for each learning objective help you think critically about the information in each chapter, enhancing your comprehension and retention of material.
  • Learning assessment questions at the conclusion of each chapter allow you to evaluate how well you have mastered the material.
  • Points to Remember sections at the end of each chapter identify key concepts in a quick-reference, bulleted format.
  • An editable and printable lab manual provides you with additional opportunities to learn course content using real-life scenarios with questions to reinforce concepts.
  • Glossary of key terms at the end of the book supplies you with a quick reference for looking up definitions.

 

  • NEW! Content about Zika and other viruses supplies students with the latest information on prevention, treatment modalities, and CDC guidelines.
  • NEW! Expanded Molecular Diagnostics chapter analyzes and explains new and evolving techniques.
  • NEW! Updated photos helps familiarize you with the equipment you’ll use in the lab.
  • NEW! Reorganized and refocused Mycology chapter helps you better understand the toxicity of fungi.
  • NEW! Updated content throughout addresses the latest information in diagnostic microbiology.

Table of Contents:

Cover image

Title Page

Table of Contents

Copyright

Dedication

Reviewers

Contributors

Preface

Organization

Pedagogic Features

Ancillaries for Instructors and Students

Acknowledgments

Part I Introduction to Clinical Microbiology

Chapter 1 Bacterial Cell Structure, Physiology, Metabolism, and Genetics

Significance

Overview of the Microbial World

Classification/Taxonomy

Comparison of Prokaryotic and Eukaryotic Cell Structure

Bacterial Morphology

Microbial Growth and Nutrition

Bacterial Biochemistry and Metabolism

Bacterial Genetics

Bibliography

Chapter 2 Host-Parasite Interaction

Origin of Microbial Biota

Composition of Microbial Biota at Different Body Sites

Role of the Microbial Biota in the Pathogenesis of Infectious Disease

Role of the Microbial Biota in the Host Defense Against Infectious Disease

Microbial Factors Contributing to Pathogenesis and Virulence

Host Resistance Factors

Mechanisms by Which Microbes May Overcome Host Defenses

Bibliography

Chapter 3 The Laboratory Role in Infection Control

General Concepts in Infection Prevention and Control Practice

Outbreak Investigation

Education

Emerging and Reemerging Pathogens

Bibliography

Chapter 4 Control of Microorganisms

Disinfection and Sterilization

Sterilization Versus Disinfection

Factors That Influence the Degree of Killing

Methods of Disinfection and Sterilization

Disinfectants Versus Antiseptics

Environmental Protection Agency Regulations on Chemical Surface Disinfectants

Food and Drug Administration Regulations on Chemical Skin Antiseptics

Microbiology Safety

General Laboratory Safety

Bioterrorism and the Clinical Microbiology Laboratory

Bibliography

Chapter 5 Performance Improvement in the Microbiology Laboratory

General Guidelines for Establishing Quality Control

Performance Improvement

Evaluating and Interpreting Diagnostic Laboratory Tests

Analytic Analysis of Tests

Clinical Analysis of Tests

Operational Analysis of Tests

Choosing a Laboratory Method

Test Validation

Bibliography

Chapter 6 Specimen Collection and Processing

Basic Principles of Specimen Collection

Preservation, Storage, and Transport of Specimens

Specimen Receipt and Processing

Culture Workup

Communication of Laboratory Findings

Bibliography

Chapter 7 Microscopic Examination of Materials From Infected Sites

Preparation of Samples

Stains

Microscopes

Terminology for Direct Examinations

Examination of Prepared Material

Grading or Classifying Materials

Reports of Direct Examinations

Initiation of Special Handling for Unsuspected or Special Pathogens

Quality Control in Direct Microscopic Interpretations

Examples of Sample Observations and Reports

Bibliography

Direct Examination Showing Local and Contaminating Materials

Direct Examination in Common Bacterial Infections

Direct Examination in Gram-Positive Bacillary Infections

Direct Examination in Uncommon Gram-Positive Bacilli

Direct Examination in Gram-Positive Bacilli with Filaments and Branches

Direct Examination in Selected Gram-Negative Bacterial Infections

Direct Examination in Selected Gram-Negative Bacillary Infections

Direct Examination in Polymicrobial Infections

Direct Examination in Fungal Infections

Direct Examination in Parasitic Infections

Direct Examination in Viral Infections

Chapter 8 Use of Colony Morphology for the Presumptive Identification of Microorganisms

Importance of Colony Morphology as a Diagnostic Tool

Initial Observation and Interpretation of Cultures

Gross Colony Characteristics Used to Differentiate and Identify Presumptively Microorganisms

Colonies with Multiple Characteristics

Growth of Microorganisms in Liquid Media

Bibliography

Chapter 9 Biochemical Identification of Gram-Negative Bacteria

Carbohydrate Utilization

Glucose Metabolism and Its Metabolic Products

Amino Acid Utilization

Miscellaneous Tests

Manual Multitest Systems

Rapid and Automated Identification Systems

Bibliography

Chapter 10 Immunodiagnosis of Infectious Diseases

Antibodies in Serologic Testing

Antigen Detection

Principles of Immunologic Assays

Use of Serologic Testing in Specific Diseases

Direct Antigen Detection Assays

Bibliography

Chapter 11 Applications of Molecular Diagnostics

Nucleic Acid Hybridization Techniques

Nucleic Acid Amplification Procedures

Strain Typing and Identification

Future of Molecular Diagnostics Testing in the Clinical Microbiology Laboratory

Nanomedicine

Bibliography

Chapter 12 Antibacterial Mechanisms of Action and Bacterial Resistance Mechanisms

Antimicrobial Targets and Mechanisms of Action

Mechanisms of Antimicrobial Resistance

β-Lactamase Inhibitors

Dissemination of Resistance Determinants

Nanotechnology to Deliver Therapeutic Agents

Bibliography

Chapter 13 Antimicrobial Susceptibility Testing

Procedures in Antimicrobial Susceptibility Testing

Reasons and Indications for Performing Antimicrobial Susceptibility Tests

Selecting Antimicrobial Agents for Testing and Reporting

Traditional Antimicrobial Susceptibility Test Methods

Automated Antimicrobial Susceptibility Test Methods

Interpretation of In Vitro Antimicrobial Susceptibility Test Results

Methods of Detecting Antimicrobial-Inactivating Enzymes

Quality Control of Antimicrobial Susceptibility Tests

Selecting an Antimicrobial Susceptibility Test Method

Susceptibility Testing Challenges

Special Antimicrobial Susceptibility Tests

Minimum Bactericidal Concentration Test

Time-Kill Assays

Synergy Tests

Serum Bactericidal Test

Molecular Probes for Identifying Determinants of Antimicrobial Resistance

Measurement of Antimicrobial Agents in Serum and Body Fluids

Bibliography

Part II Laboratory Identification of Significant Isolates

Chapter 14 Staphylococci

General Characteristics

Clinically Significant Species

Laboratory Diagnosis

Antimicrobial Susceptibility

Bibliography

Chapter 15 Streptococcus, Enterococcus, and Other Catalase-Negative, Gram-Positive Cocci

General Characteristics

Clinically Significant Streptococci and Streptococcus-Like Organisms

Laboratory Diagnosis

Bibliography

Chapter 16 Aerobic Gram-Positive Bacilli

Non–Spore-Forming, Nonbranching, Catalase-Positive Bacilli

Non–Spore-Forming, Nonbranching, Catalase-Negative Bacilli

Non–Spore-Forming, Branching, Aerobic Actinomycetes

Spore-Forming, Nonbranching, Catalase-Positive Bacilli

Bibliography

Chapter 17 Neisseria Species and Moraxella catarrhalis

General Characteristics

Pathogenic Neisseria Species

Commensal Neisseria Species

Bibliography

Chapter 18 Haemophilus, HACEK, Legionella, and Other Fastidious Gram-Negative Bacilli

Chapter Outline

Objectives

Key Terms

Haemophilus

HACEK Group

Capnocytophaga

Pasteurella

Brucella

Francisella

Bibliography

Chapter Outline

Objectives

Key Terms

Legionella

Laboratory Diagnosis

Bordetella

Bibliography

Chapter 19 Enterobacteriaceae

General Characteristics

Opportunistic Members of the Family Enterobacteriaceae and Associated Infections

Primary Intestinal Pathogens of the Family Enterobacteriaceae

Other Genera of the Family Enterobacteriaceae

Laboratory Diagnosis of Enterobacteriaceae

Bibliography

Chapter 20 Vibrio, Aeromonas, and Campylobacter Species

Vibrio

Aeromonas

Campylobacter and Campylobacter-Like Species

Bibliography

Chapter 21 Nonfermenting and Miscellaneous Gram-Negative Bacilli

General Characteristics of Nonfermenters

Clinically Significant Nonfermentative, Gram-Negative Bacilli

Less Commonly Encountered Nonfermentative, Gram-Negative Bacilli

Bibliography

Chapter 22 Anaerobes of Clinical Importance

Important Concepts in Anaerobic Bacteriology

Frequently Encountered Anaerobes and Their Associated Diseases

Specimen Selection, Collection, Transport, and Processing

Procedures for Identifying Anaerobic Isolates

Antimicrobial Susceptibility Testing

Treatment of Anaerobe-Associated Diseases

Bibliography

Chapter 23 The Spirochetes

Leptospires

Borreliae

Treponemes

Bibliography

Chapter 24 Chlamydia, Rickettsia, and Similar Organisms

Chlamydiaceae

Rickettsiaceae and Similar Organisms

Bibliography

Chapter 25 Mycoplasma and Ureaplasma

General Characteristics

Clinical Infections

Laboratory Diagnosis

Antimicrobial Susceptibility

Interpretation of Laboratory Results

Bibliography

Chapter 26 Mycobacterium tuberculosis and Nontuberculous Mycobacteria

General Characteristics

Clinical Significance of the Mycobacterium Tuberculosis Complex

Clinical Significance of Nontuberculous Mycobacteria

Mycobacterium leprae

Isolation and Identification of Mycobacteria

Susceptibility Testing of Mycobacterium tuberculosis

Immunodiagnosis of Mycobacterium tuberculosis Infection

Bibliography

Chapter 27 Medically Significant Fungi

General Characteristics

Taxonomy

Mycoses

Clinically Significant Species

Laboratory Diagnosis of Fungi

Immunodiagnosis of Fungal Disease

Antifungal Susceptibility

Bibliography

Chapter 28 Diagnostic Parasitology

General Concepts in Parasitology Laboratory Methods

Medically Important Parasitic Agents

Bibliography

Chapter 29 Clinical Virology

Characteristics of Viruses

Laboratory Diagnosis of Viral Infections

Double-Stranded DNA Viruses

Single-Stranded DNA Viruses

Double-Stranded RNA Viruses

Single-Stranded RNA Viruses

Hepatitis Viruses

Prions

Antiviral Therapy

Bibliography

Chapter 30 Agents of Bioterror and Forensic Microbiology

Laboratory Response Network

General Characteristics of Biological Threat Agents

Biosafety

Biosafety Levels

Agents of Bioterror

Other Biological Agents and Toxins

Pandemic Preparedness and Bioterrorism Readiness

Concluding Thoughts

Forensic Microbiology

Bibliography

Chapter 31 Biofilms

Microbial Biofilms Defined

Architecture of Biofilms

Biofilm Properties

Mechanisms of Pathogenicity

Diseases Associated with Biofilms

Laboratory Consequences Associated with Biofilms

Detection of Biofilms

Potential Interventions

Bibliography

Part III Laboratory Diagnosis of Infectious Diseases: An Organ System Approach to Diagnostic Microbiology

Chapter 32 Upper and Lower Respiratory Tract Infections

General Concepts of Infectious Diseases of The Respiratory Tract

Host Risk Factors

Virulence Factors of Pathogenic Organisms

Upper Respiratory Tract Infections

Lower Respiratory Tract Infections

Respiratory Tract Infections in the Immunocompromised Host

Bioterrorism and Respiratory Infections

References

Chapter 33 Skin and Soft Tissue Infections

Anatomy of the Skin

Localized Bacterial and Fungal Skin Infections

Dermatologic Manifestations of Systemic Bacterial and Fungal Infections

Viral Infections

Parasitic Infections

Immune- or Toxin-Mediated Dermatologic Manifestations of Infectious Agents

Laboratory Diagnosis

Bibliography

Chapter 34 Gastrointestinal Infections and Food Poisoning

Evaluating Gastrointestinal Infections and Food Poisoning

Anatomic Considerations

Approach to Diagnosis of the Patient with Diarrhea

Clinical Presentation and Pathogenic Mechanisms of Acute Diarrhea

Common Viral, Bacterial, and Parasitic Pathogens

Diarrhea in Special Circumstances

Laboratory Diagnosis of Gastrointestinal Pathogens

Treatment and Prevention of Diarrhea

Bibliography

Chapter 35 Infections of the Central Nervous System

General Concepts Related to Infections of the Central Nervous System

Central Nervous System Infections

Laboratory Diagnosis

Bibliography

Chapter 36 Bacteremia and Sepsis

General Concepts Related to Bacteremic Infections

Epidemiology

Causes

Pathogenesis

Clinical Aspects of Bacteremia

Laboratory Diagnosis

Treatment

Prevention

Bibliography

Chapter 37 Urinary Tract Infections

Introduction

The Urinary System

Epidemiology and Risk Factors

Clinical Signs and Symptoms

Causes of Urinary Tract Infections

Laboratory Diagnosis

Microbial Detection

Interpretation of Results

Susceptibility Reporting

Bibliography

Chapter 38 Genital Infections and Sexually Transmitted Infections

Urethritis

Cervicitis

Vulvovaginitis

Genital Ulcer Disease

Acquired Immunodeficiency Syndrome

Other Sexually Transmitted Diseases

Bibliography

Chapter 39 Infections in Special Populations

Health Care–Associated Infections

Ventilator-Associated Pneumonia

Malignancy

Acquired Immunodeficiency Syndrome

Complement Deficiency

Burns

Organ Transplantation

Postsplenectomy Sepsis

Cystic Fibrosis

Diabetes

Aging

Pregnancy, the Fetus, and the Neonate

Bibliography

Chapter 40 Zoonotic Diseases

Key Terms

Transmission by Scratches and Bites From Domestic or Wild Animals

Transmission by Direct Contact or Inhalation

Transmission by Arthropod Vectors

Emerging Zoonoses

Bibliography

Chapter 41 Ocular Infections

General Concepts Related to Ocular Infections

Infections of the Conjunctivae

Infections of the Eyelids

Infections of the Cornea

Infections of the Sclera and Episclera

Infections of the Orbit

Infections of the Lacrimal Apparatus

Infections of the Intraocular Chambers

Biofilm-Centered Ocular Infections

Laboratory Diagnosis of Ocular Infections

Bibliography

Appendix A Selected Bacteriologic Culture Media

Acetate Agar

Alkaline Peptone Water

American Trudeau Society Medium

Bacteroides Bile Esculin Agar

Bile Esculin Agar

Bismuth Sulfite Agar

Blood Agar, Anaerobic, Brucella Base, Wadsworth

Blood Agar, Anaerobic, CDC

Blood Agar, Anaerobic, Laked, With Kanamycin, Vancomycin, and Vitamin K

Blood Agar, Anaerobic, With Kanamycin and Vancomycin

Blood Agar, Rabbit

Blood Agar, Sheep

Blood Phenylethyl Alcohol Agar, Anaerobic, CDC

Bordet-Gengou Blood Agar

Brain-Heart Infusion Broth

Buffered Charcoal Yeast Extract Agar

Burkholderia cepacia Agar

Burkholderia cepacia Selective Agar

Campylobacter Blood Agar (Campy-BA)

Campylobacter Charcoal Differential Agar

Campylobacter Thioglycolate Broth

Cefsulodin-Irgasan-Novobiocin

Cetrimide Agar

Chocolate Agar

CHROMagars

Citrate Agar, Simmons

Columbia Agar With and Without 5% Sheep Blood

Cooked Meat (Chopped Meat Glucose) Medium

Cycloserine Cefoxitin Fructose Agar

Cystine Tryptic Agar With Sugar

Decarboxylase Test Medium (Moeller)

Deoxyribonuclease (DNase) Test Agar

Dilute Gelatin Medium (0.4%)

Egg Yolk Agar, CDC Formulation

Eosin–Methylene Blue Agar

Esculin Agar

Fletcher Semisolid Medium for Leptospira

Gelatin Medium (Nutrient)

Gram-Negative Broth

Haemophilus Test Medium

Hektoen Enteric Agar

Hippurate Broth

Hydrogen Sulfide, Lead Acetate

Kligler Iron Agar

Lim Broth

Loeffler Coagulated Serum Slant

Löwenstein-Jensen Medium

Lysine Iron Agar

MacConkey Agar

MacConkey Sorbitol Agar

Malonate Broth

Mannitol Salt Agar

Methyl Red Voges-Proskauer Medium

Middlebrook 7H10 and 7H11 Agars

Mitchison 7H11 Selective Agar

Modified Thayer-Martin Agar

Motility Test Medium

Mueller-Hinton Agar

Mueller-Hinton Agar With 2% NaCl

Mueller-Hinton Agar With 4% NaCl and 6 µg Oxacillin

New York City Medium

Nitrate Reduction Broth

Nutrient Agar

Oxidative-Fermentative Medium (Hugh and Leifson Formulation)

Oxidative-Fermentative Polymyxin B–Bacitracin-Lactose Agar

Peptone–Yeast Extract–Glucose Broth

Phenylalanine Deaminase Agar

Phenylethyl Alcohol Agar

Potassium Tellurite Blood Agar

PPLO Agar

Regan-Lowe Medium

Salmonella-Shigella Agar

Schaedler Agar

Selenite Broth

Sodium Chloride Broth, 6.5%

SP-4 Broth and SP-4 Agar

Streptococcus-Selective Agar

Tetrathionate Broth

Thioglycollate Broth, Basal and Enriched

Thiosulfate Citrate Bile Salts Sucrose Agar

Tinsdale Agar

Todd-Hewitt Broth With Gentamicin and Nalidixic Acid

Triple Sugar Iron Agar

Trypticase Soy Agar

Trypticase Soy Broth

Tryptophan Broth, 1%

Urea Agar and Broth

Vaginalis Agar

Xylose-Lysine-Desoxycholate Agar

Bibliography

Appendix B Selected Mycology Media, Fluids, and Stains

Fungal Media

Fungal Mounting Fluid

Fungal Stains

Bibliography

Appendix C Selected Procedures

Appendix D Answers to Learning Assessment Questions

Glossary

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